Changelog#

Name

PR

Developer

Date

Version

โœจ Added TreatmentBase

68

sunnyosun

2023-05-15

0.15.1

๐Ÿ—๏ธ Turn into base model module lnschema-wetlab โ†’ lnbase-biolab

67

falexwolf

2023-04-22

0.15.0

๐Ÿšš Move Readout to lnschema-bionty

66

sunnyosun

2023-03-27

0.15rc2

๐Ÿšš Rename DObject to File

65

falexwolf

2023-03-24

0.15rc1

โœจ Auto population of readout

64

sunnyosun

2023-03-23

0.14.0

๐Ÿ”ฅ Remove migration files

63

sunnyosun

2023-02-15

โฌ†๏ธ Upgrade and rename lndb_setup to lndb (v0.32.0)

61

bpenteado

2023-02-13

0.13.4

๐Ÿ”ฅ Move the tests of sample submission to lndb-rest

60

sunnyosun

2023-01-17

0.13.3

๐Ÿšš Removed species from BiosampleBase

59

sunnyosun

2023-01-17

0.13.2

๐Ÿ‘ท Extend CI to py3.8-3.10

58

sunnyosun

2023-01-12

โ™ป๏ธ Upgrade lnschema-core legacy

57

falexwolf

2023-01-09

0.13.1

๐Ÿ“ Test edge cases and polish datasets

56

bpenteado

2022-12-21

๐Ÿšš Remove external_id

55

falexwolf

2022-12-15

0.13.0

๐Ÿ“ Prettify and exemplify sample submission documentation

54

bpenteado

2022-12-13

0.12.2

๐ŸŽจ Use prefix instead of wetlab in the link tables

52

sunnyosun

2022-12-13

๐Ÿ“ Create sample submission documentation and testing

53

bpenteado

2022-12-12

๐Ÿ› Fix type annotations

51

falexwolf

2022-12-08

0.12.1

๐ŸŽจ Refactor, turn all classes into base classes, drop Treatment from this module

50

falexwolf

2022-12-07

0.12.0

๐Ÿฉน Fix sample submission printed feedback

49

bpenteado

2022-12-06

0.11.5

โœจ Create sample submission support functions

45

bpenteado

2022-12-06

0.11.4

๐Ÿ› Fix sqlmodel_relationships

48

sunnyosun

2022-12-06

0.11.3

๐ŸŽจ Inherit simple relationships

47

sunnyosun

2022-12-06

0.11.2

๐Ÿ› Add back regular relationships

46

falexwolf

2022-12-05

0.11.1

โœจ BiosampleBase

44

sunnyosun

2022-12-05

0.11.0

๐Ÿ”ฅ Comment out ProjectExperiment

43

sunnyosun

2022-11-29

0.10.4

โœจ Added created_by to all tables

42

sunnyosun

2022-11-29

0.10.3

๐Ÿฉน Add to __sqlmodel_relationships__

41

sunnyosun

2022-11-28

0.10.2

โœจ Add relationship of bio and tech samples

40

sunnyosun

2022-11-25

0.10.1

๐Ÿ—๏ธ Drop Biometa

39

falexwolf

2022-11-22

0.10.0

๐ŸŽจ Define Readout first

38

falexwolf

2022-11-22

0.9.2

โœจ Add relationships to Biosample

36

falexwolf

2022-11-21

0.9.1

๐Ÿ—๏ธ Introduce relationships

35

falexwolf

2022-11-17

0.9.0

๐Ÿ› Fix table name

34

falexwolf

2022-11-03

0.8.2

๐Ÿ› Fix treatment ref

33

falexwolf

2022-11-03

0.8.1

๐ŸŽจ Modularize and capitalize

32

falexwolf

2022-11-03

0.8.0

โœจ Added project_experiment table

31

sunnyosun

2022-10-20

0.7.2

๐Ÿšš Moved the project table to core schema

30

sunnyosun

2022-10-19

0.7.1

๐Ÿ”ฅ Removed cell_marker_id from biosample

29

sunnyosun

2022-10-17

0.7.0

๐Ÿšš Added created_by to project table

28

falexwolf

2022-10-14

0.6.0

โฌ†๏ธ Upgrade to lnschema_core 0.9.0

27

falexwolf

2022-09-30

0.5.0

โœ๏ธ Changed ids to str

26

sunnyosun

2022-09-29

0.4.3

๐Ÿฑ Added treatment, removed techsample_id in biosample

25

sunnyosun

2022-09-28

0.4.2

๐ŸŽจ Added biosample_techsample, changed imports to default

24

sunnyosun

2022-09-28

0.4.1

๐ŸŽจ Fix type annotations and link table

23

falexwolf

2022-09-26

0.4.0

๐Ÿ› Fix type annotation of timestamps

22

falexwolf

2022-09-24

๐ŸŽจ Update all primary keys to base62 and overhaul bio & techsample tables

21

falexwolf

2022-09-23

๐Ÿฑ Add migrations infra

20

falexwolf

2022-09-23

โœจ Added filepath to techsample

19

sunnyosun

2022-09-13

0.3.7

๐ŸŽจ Added external_id

17

sunnyosun

2022-09-06

0.3.6

๐Ÿ› fixed the foreign key types

16

sunnyosun

2022-09-01

0.3.5

๐Ÿšš Rename project to project_id in the experiment table

15

sunnyosun

2022-08-30

0.3.4

๐ŸŽจ Restrict efo_id to be unique

14

sunnyosun

2022-08-30

0.3.3

๐ŸŽจ Updated biosample table to include more columns

13

sunnyosun

2022-08-28

0.3.2

๐Ÿšš Rename readout_type to readout, add descriptions

12

sunnyosun

2022-08-26

0.3.1

๐Ÿ—๏ธ Make table load configurable

11

falexwolf

2022-08-25

0.3.0

๐ŸŽจ Default bio and tech samples

10

sunnyosun

2022-08-25

๐Ÿ› Imported additional tables

9

sunnyosun

2022-08-24

0.2.4

โœจ Added techsample table

8

sunnyosun

2022-08-24

0.2.3

โœ๏ธ Fixed id type to int

7

sunnyosun

2022-08-23

0.2.2

โœจ Added experiment and experiment_type tables.

6

sunnyosun

2022-08-23

0.2.1

๐Ÿšš Rename lndb-schema-wetlab to lnbase-biolab

5

falexwolf

2022-08-19

0.2.0

๐Ÿ”ง Add schema module id

4

falexwolf

2022-08-18

๐ŸŽจ Updated readout to use EFO

3

sunnyosun

2022-08-10

0.1.2

๐Ÿ› Add correct wetlab schema

2

falexwolf

2022-07-31

๐Ÿšš Add code from lnschema-biology

1

falexwolf

2022-07-31

0.1.0